Values used for denominators in frequency calculations

These values are used to cross reference base substitution types to their appropriate denominators for calculations. That is", "for example, the 6 base substitution frequency should be subsetted based on the normalized_ref column which would contain only T or C (i.e., the pyrimidine context for base substitutions).

Usage

denominator_dict

Format

A vector with corresponding values

Examples

denominator_dict["base_96"]
#>              base_96 
#> "normalized_context" 
denominator_dict["type"]
#> type 
#>   NA