Get the reverse complement of a DNA or RNA sequence.

Usage

reverseComplement(
  x,
  content = c("dna", "rna"),
  case = c("lower", "upper", "as is")
)

Arguments

x: A character vector of DNA or RNA sequences.
content: c("dna", "rna") The type of sequence to be reversed.
case: c("lower", "upper", "as is") The case of the output sequence.

Value

A character vector of the reverse complement sequences.

Details

This file is part of the source code for SPGS: an R package for identifying statistical patterns in genomic sequences. Copyright (C) 2015 Universidad de Chile and INRIA-Chile A copy of Version 2 of the GNU Public License is available in the share/licenses/gpl-2 file in the R installation directory or from http://www.R-project.org/Licenses/GPL-2. reverseComplement.R